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Dr Charlie Bond

The Academic Details listed below present information collected by the University up to the end of 2013 and thus may not represent the full academic record.

C1: Journal Article (Schol Refereed Journal)

James, A., Jayasena, A., Zhang, J., Berkowitz, O., Secco, D., Knott, G., Whelan, J., Bond, C., Mylne, J. 2017, 'Evidence for ancient origins of bowman-birk inhibitors from Selaginella moellendorffii', PLANT CELL, 29, 3, pp. 461-473. Detail

Thomas-Jinu, S., Gordon, P., Fielding, T., Taylor, R., Smith, B., Snowden, V., Blanc, E., Vance, C., Topp, S., Wong, C., Bielen, H., Williams, K., McCann, E., Nicholson, G., Pan-Vazquez, A., Fox, A., Bond, C., Talbot, W., Blair, I., Shaw, C., Houart, C. 2017, 'Non-nuclear Pool of Splicing Factor SFPQ Regulates Axonal Transcripts Required for Normal Motor Development', NEURON, 94, 2, pp. 322-336.e5. Detail

Cheng, S., Gutmann, B., Zhong, X., Ye, Y., Fisher, M., Bai, F., Castleden, I., Song, Y., Song, B., Huang, J., Liu, X., Xu, X., Lim, B., Bond, C., Yiu, S., Small, I. 2016, 'Redefining the structural motifs that determine RNA binding and RNA editing by pentatricopeptide repeat proteins in land plants', PLANT JOURNAL, 85, 4, pp. 532-547. Detail

Knott, G., Bond, C., Fox, A. 2016, 'The DBHS proteins SFPQ, NONO and PSPC1: A multipurpose molecular scaffold', NUCLEIC ACIDS RESEARCH, 44, 9, pp. 3989-4004. Detail

Helder, S., Blythe, A., Bond, C., Mackay, J. 2016, 'Determinants of affinity and specificity in RNA-binding proteins', CURRENT OPINION IN STRUCTURAL BIOLOGY, 38, pp. 83-91. Detail

Knott, G., Panjikar, S., Thorn, A., Fox, A., Conte, M., Lee, M., Bond, C. 2016, 'A crystallographic study of human NONO (p54<sup>nrb</sup>): overcoming pathological problems with purification, data collection and noncrystallographic symmetry', Acta Crystallographica Section D-Structural Biology, 72, 6, pp. 761-769. Detail

West, J., Mito, M., Kurosaka, S., Takumi, T., Tanegashima, C., Chujo, T., Yanaka, K., Kingston, R., Hirose, T., Bond, C., Fox, A., Nakagawa, S. 2016, 'Structural, super-resolution microscopy analysis of paraspeckle nuclear body organization', JOURNAL OF CELL BIOLOGY, 214, 7, pp. 817-830. Detail

Newsholme, P., Hartmann, P., Tuckey, R., Bond, C. 2015, 'Biochemistry in Western Australia', BIOCHEMIST, 37, 6, pp. 32-34. Detail

Hennig, S., Kong, G., Mannen, T., Sadowska, A., Kobelke, S., Blythe, A., Knott, G., Swaminatha Iyer, K., Ho, D., Newcombe, E., Hosoki, K., Goshima, N., Kawaguchi, T., Hatters, D., Trinkle-Mulcahy, L., Hirose, T., Bond, C., Fox, A. 2015, 'Prion-like domains in RNA binding proteins are essential for building subnuclear paraspeckles', JOURNAL OF CELL BIOLOGY, 210, 4, pp. 529-539. Detail

Knott, G., Lee, M., Passon, D., Fox, A., Bond, C. 2015, 'Caenorhabditis elegans NONO-1: Insights into DBHS protein structure, architecture, and function', PROTEIN SCIENCE, 24, 12, pp. 2033-2043. Detail

Gully, B., Shah, K., Lee, M., Shearston, K., Smith, N., Sadowska, A., Blythe, A., Bernath-Levin, K., Stanley, W., Small, I., Bond, C. 2015, 'The design and structural characterization of a synthetic pentatricopeptide repeat protein', ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 71, 2, pp. 196-208. Detail

Shi, M., Sobolev, A., Schirmeister, T., Engels, B., Schmidt, T., Luger, P., Mebs, S., Dittrich, B., Chen, Y., Bak, J., Jayatilaka, D., Bond, C., Turner, M., Stewart, S., Spackman, M., Grabowsky, S. 2015, 'Electrostatic complementarity in pseudoreceptor modeling based on drug molecule crystal structures: The case of loxistatin acid (E64c)', NEW JOURNAL OF CHEMISTRY, 39, 3, pp. 1628-1633. Detail

Kindgren, P., Yap, A., Bond, C., Small, I. 2015, 'Predictable alteration of sequence recognition by RNA editing factors from arabidopsis', PLANT CELL, 27, 2, pp. 403-416. Detail

Lee, M., Sadowska, A., Bekere, I., Ho, D., Gully, B., Lu, Y., Swaminatha Iyer, K., Trewhella, J., Fox, A., Bond, C. 2015, 'The structure of human SFPQ reveals a coiled-coil mediated polymer essential for functional aggregation in gene regulation', NUCLEIC ACIDS RESEARCH, 43, 7, pp. 3826-3840. Detail

Gully, B., Cowieson, N., Stanley, W., Shearston, K., Small, I., Barkan, A., Bond, C. 2015, 'The solution structure of the pentatricopeptide repeat protein PPR10 upon binding atpH RNA', NUCLEIC ACIDS RESEARCH, 43, 3, pp. 1918-1926. Detail

Conn, C., Bythell-Douglas, R., Neumann, D., Yoshida, S., Whittington, B., Westwood, J., Shirasu, K., Bond, C., Dyer, K., Nelson, D. 2015, 'Convergent evolution of strigolactone perception enabled host detection in parasitic plants', SCIENCE, 349, 6247, pp. 540-543. Detail

Bythell-Douglas, R., Suttisansanee, U., Flematti, G., Challenor, M., Lee, M., Panjikar, S., Honek, J., Bond, C. 2015, 'The crystal structure of a homodimeric Pseudomonas glyoxalase I enzyme reveals asymmetric metallation commensurate with half-of-sites activity', CHEMISTRY-A EUROPEAN JOURNAL, 21, 2, pp. 541-544. Detail

Boussardon, C., Avon, A., Kindgren, P., Bond, C., Challenor, M., Lurin, C., Small, I. 2014, 'The cytidine deaminase signature HxE(x)nCxxC of DYW1 binds zinc and is necessary for RNA editing of ndhD-1', NEW PHYTOLOGIST, 203, 4, pp. 1090-1095. Detail

Meyer, G., Aragão, D., Mudie, N., Caradoc-Davies, T., Mcgowan, S., Bertling, P., Groenewegen, D., Quenette, S., Bond, C., Buckle, A., Androulakis, S. 2014, 'Operation of the Australian Store.Synchrotron for macromolecular crystallography', ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 70, 10, pp. 2510-2519. Detail

Middleton, C., Parker, J., Knott, G., White, M., Bond, C. 2014, 'Crystal 'unengineering': Reducing the crystallisability of sulfolobus solfataricus hjc', AUSTRALIAN JOURNAL OF CHEMISTRY, 67, 12, pp. 1818-1823. Detail

Pröpper, K., Holstein, J., Hübschle, C., Bond, C., Dittrich, B. 2013, 'Invariom refinement of a new monoclinic solvate of thiostrepton at 0.64 Å resolution', ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 69, pp. 1530-1539. Detail

Bythell-Douglas, R., Waters, M., Scaffidi, A., Flematti, G., Smith, S., Bond, C. 2013, 'The Structure of the Karrikin-Insensitive Protein (KAI2) in <em>Arabidopsis thaliana</em>', PLoS One, 8, 1, pp. 1-8. Detail

Ling, I., Swaminatha Iyer, K., Bond, C., Sobolev, A., Alias, Y., Raston, C. 2012, 'Sodium ion association <em>via</em> bridging water molecules for different charged <em>p</em>-phosphonated calix[4]arene bilayers', CRYSTENGCOMM, 14, 24, pp. 8541–8546. Detail

Scaffidi, A., Waters, M., Bond, C., Dixon, K., Smith, S., Ghisalberti, E., Flematti, G. 2012, 'Exploring the molecular mechanism of karrikins and strigolactones', BIOORGANIC & MEDICINAL CHEMISTRY LETTERS, 22, 11, pp. 3743-3746. Detail

Scaffidi, A., Waters, M., Skelton, B., Bond, C., Sobolev, A., Bythell-Douglas, R., Mckinley, A., Dixon, K., Ghisalberti, E., Smith, S., Flematti, G. 2012, 'Solar irradiation of the seed germination stimulant karrikinolide produces two novel head-to-head cage dimers', ORGANIC & BIOMOLECULAR CHEMISTRY, 10, 20, pp. 4069-4073. Detail

Passon, D., Lee, M., Rackham, O., Stanley, W., Sadowska, A., Filipovska, A., Fox, A., Bond, C. 2012, 'Structure of the heterodimer of human NONO and paraspeckle protein component 1 and analysis of its role in subnuclear body formation', PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 109, 13, pp. 4846-4850. Detail

Tan, K., Ferguson-Hunt, M., Rybak, K., Waters, O., Stanley, W., Bond, C., Stukenbrock, E., Friesen, T., Faris, J., Mcdonald, B., Oliver, R. 2012, 'Quantitative Variation in Effector Activity of ToxA Isoforms from Stagonospora nodorum and Pyrenophora tritici-repentis', MOLECULAR PLANT-MICROBE INTERACTIONS, 25, 4, pp. 515-522. Detail

Gully, B., Zou, J., Cadby, G., Passon, D., Swaminatha Iyer, K., Bond, C. 2012, 'Colloidal graphenes as heterogeneous additives to enhance protein crystal yield', Nanoscale, 17, pp. 5321-5324. Detail

Barkan, A., Rojas, M., Fujii, S., Yap, A., Chong, Y., Bond, C., Small, I. 2012, 'A Combinatorial Amino Acid Code for RNA Recognition by Pentatricopeptide Repeat Proteins', PLoS Genetics, 8, 8, pp. 1-8. Detail

Fujii, S., Bond, C., Small, I. 2011, 'Selection patterns on restorer-like genes reveal a conflict between nuclear and mitochondrial genomes throughout angiosperm evolution', PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 108, 4, pp. 1723-1728. Detail

Lee, M., Passon, D., Hennig, S., Fox, A., Bond, C. 2011, 'Construct optimization for studying protein complexes: obtaining diffraction-quality crystals of the pseudosymmetric PSPC1-NONO heterodimer', ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 67, 11, pp. 981-987. Detail

Passon, D., Lee, M., Fox, A., Bond, C. 2011, 'Crystallization of a paraspeckle protein PSPC1-NONO heterodimer', ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY AND CRYSTALLIZATION COMMUNICATIONS, 67, 10, pp. 1231-1234. Detail

Martin, A., Boulos, R., Swaminathan Iyer, K., Sobolev, A., Bond, C., Atwood, J., Dalgarno, S., Raston, C. 2011, 'Solvent and hydrogen confinement in molecular capsules-Hirshfeld surface and molecular simulation analysis', CHEMICAL COMMUNICATIONS, 47, pp. 9882-9884. Detail

Williams, C., Schueller, N., Thompson, C., Van Den Berg, M., Van Haren, S., Erdmann, R., Bond, C., Distel, B., Schliebs, W., Wilmanns, M., Stanley, W. 2011, 'The Peroxisomal Targeting Signal 1 in sterol carrier protein 2 is autonomous and essential for receptor recognition', BMC BIOCHEMISTRY, 12, pp. 8pp. Detail

Dittrich, B., Bond, C., Kalinowski, R., Spackman, M., Jayatilaka, D. 2010, 'Revised electrostatics from invariom refinement of the 18-residue peptaibol antibiotic trichotoxin A50E', CRYSTENGCOMM, 12, pp. 2419-2423. Detail

LI, J., FRANCISCO, P., ZHOU, W., EDNER, C., STEUP, M., RITTE, G., BOND, C.S., SMITH, S.M. 2009, 'Catalytically-inactive β-amylase BAM4 required for starch breakdown in Arabidopsis leaves is a starch-binding-protein', Archives of Biochemistry and Biophysics, doi:10.1016/j.abb.2009.07.024, pp. 92-98. Detail

Bond, C., Fox, A. 2009, 'Paraspeckles: nuclear bodies built on long noncoding RNA', JOURNAL OF CELL BIOLOGY, 186, 5, pp. 637-644. Detail

Payne, E., Ingley, E., Dick, I., Wilson, S., Bond, C., Prince, R. 2009, 'In Vitro Kinetic Properties of the Thr201Met Variant of Human Aromatase Gene CYP19A1 : Functional Responses to Substrate and Product Inhibition and Enzyme Inhibitors', JOURNAL OF CLINICAL ENDOCRINOLOGY & METABOLISM, 94, 8, pp. 2998-3002. Detail

Bond, C., Schuttelkopf, A. 2009, 'ALINE: a WYSIWYG protein-sequence alignment editor for publication-quality alignments', ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 65, 5, pp. 510-512. Detail

Iyer, K., Bond, C., Saunders, M., Raston, C. 2008, 'Confinement of Silver Triangles in Silver Nanoplates Templated by Duplex DNA', CRYSTAL GROWTH & DESIGN, 8, 5, pp. 1451-1453. Detail

Delannoy, E., Stanley, W., Bond, C., Small, I. 2007, 'Pentatricopeptide repeat (PPR) proteins as sequence-specificity factors in post-transcriptional processes in organelles', BIOCHEMICAL SOCIETY TRANSACTIONS, 35, Part 6, pp. 1643-1647. Detail

Gabrielsen, M., Kaiser, J., Rohdich, F., Eisenreich, W., Laupitz, R., Bacher, A., Bond, C., Hunter, W. 2006, 'The crystal structure of a plant 2C-methyl-D-erythritol 4-phosphate cytidylyltransferase exhibits a distinct quaternary structure compared to bacterial homologues and a possible role in feedback regulation for cytidine monophosphate', FEBS Journal, 273, 5, pp. 1065-1073. Detail

Ariza, A., Vickers, T., Greig, N., Armour, K., Dixon, M., Eggleston, D., Fairlamb, A., Bond, C. 2006, 'Specificity of the trypanothione-dependent Leishmania major glyoxalase 1 : structure and biochemical comparison with the human enzyme', MOLECULAR MICROBIOLOGY, 59, 4, pp. 1239-1248. Detail

Ariza, A., Richard, D., White, M., Bond, C. 2005, 'Conformational Flexibility revealed by the crystal structure of a crenarchaeal RadA', NUCLEIC ACIDS RESEARCH, 33, 5, pp. 1465-1473. Detail

Kemp, L., Alphey, M., Bond, C., Ferguson, M., Hecht, S., Bacher, A., Eisenreich, W., Rohdich, F., Hunter, W. 2005, 'The identification of isoprenoids that bind in the intersubunit cavity of Escherichia coli 2C-methyl-D-erythritol-2,4-cyclodiphosphate synthase by complementary biophysical methods', ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 61, 1, pp. 45-52. Detail

Ariza, A., Vickers, T., Greig, N., Fairlamb, A., Bond, C. 2005, 'Crystallization and preliminary X-ray analysis of Leishmania major glyoxalase I', ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY AND CRYSTALLIZATION COMMUNICATIONS, 61, 8, pp. 769-772. Detail

Fox, A., Bond, C., Lamond, A. 2005, 'P54nrb Forms a Heterodimer with PSP1 that localises to Paraspeckles in an RNA-dependent Manner', MOLECULAR BIOLOGY OF THE CELL, 16, pp. 5304-5315. Detail

Graham, S.C., Bond, C.S., Freeman, H.C., Guss, J.M. 2005, 'Structural and Functional Implications of Metal Ion Selection in Aminopeptidase P, a Metalloprotease with a Dinuclear Metal Center', BIOCHEMISTRY, 44, 42, pp. 13820-13836. Detail

Saravanamuthu, A., Vickers, T., Bond, C., Peterson, M., Hunter, W., Fairlamb, A. 2004, 'Two Interacting Binding Sites for Quinacrine Derivatives in the Active Site of Trypanothione Reductase', JOURNAL OF BIOLOGICAL CHEMISTRY, 279, 28, pp. 29493-29500. Detail

Gabrielsen, M., Bond, C.S., Hallyburton, I., Hecht, S., Bacher, A., Eisenreich, W., Rohdich, F., Hunter, W.N. 2004, 'Hexameric Assembly of the Bifunctional Methylerythritol 2,4-Cyclodiphosphate Synthase and Protein-Protein Associations in the Deoxy-xylulose-dependent Pathway of Isoprenoid Precursor Biosynthesis', JOURNAL OF BIOLOGICAL CHEMISTRY, 279, 50, pp. 52753-52761. Detail

Middleton, C.L., Parker, J.L., Richard, D.J., White, M.F., Bond, C.S. 2004, 'Substrate recognition and catalysis by the Holliday junction resolving enzyme Hje', NUCLEIC ACIDS RESEARCH, 32, 18, pp. 5442-5451. Detail

Alphey, M., Gabrielsen, M., Micossi, E., Leonard, G., Mcsweeney, S., Ravelli, R., Tetaud, E., Fairlamb, A., Bond, C., Hunter, W. 2003, 'Tryparedoxins from Crithidia fasciculata and Trypanosoma brucei', JOURNAL OF BIOLOGICAL CHEMISTRY, 278, 28, pp. 25919-25925. Detail

Bond, C. 2003, 'TopDraw: a sketchpad for protein structure topology cartoons', BIOINFORMATICS, 19, 2, pp. 311-312. Detail

Shaw, M., Bond, C., Roper, J., Gourley, D., Ferguson, M., Hunter, W. 2003, 'High-resolution crystal structure of Trypanosoma brucei UDP-galactose 4'-epimerase: a potential target for structure-based development of novel trypanocides', MOLECULAR AND BIOCHEMICAL PARASITOLOGY, 126, 2, pp. 173-180. Detail

Kemp, L., Bond, C., Hunter, W. 2003, 'Structure of a tetragonal crystal form of Escherichia coli 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase', ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 59, 3, pp. 607-610. Detail

Hunter, W., Bond, C., Gabrielsen, M., Kemp, L. 2003, 'Structure and reactivity in the non-mevalonate pathway of isoprenoid biosynthesis', BIOCHEMICAL SOCIETY TRANSACTIONS, 31, 3, pp. 537-542. Detail

Kvaratskhelia, M., Wardleworth, B.N., Bond, C.S., Fogg, J.M., Lilley, D.M.J., White, M.F. 2002, 'Holliday Junction Resolution Is Modulated by Archaeal Chromatin Components in Vitro', JOURNAL OF BIOLOGICAL CHEMISTRY, 277, 4, pp. 2992-2996. Detail

Kemp, L.E., Bond, C.S., Hunter, W.N. 2002, 'Structure of 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase: An essential enzyme for isoprenoid biosynthesis and target for antimicrobial drug development', PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 99, 10, pp. 6591-6596. Detail

Hall, D.R., Bond, C.S., Leonard, G.A., Watt, C.I., Berry, A., Hunter, W.N. 2002, 'Structure of Tagatose-1,6-bisphosphate Aldolase', JOURNAL OF BIOLOGICAL CHEMISTRY, 277, 24, pp. 22018-22024. Detail

Mehlert, A., Bond, C., Ferguson, M. 2002, 'The glycoforms of a Trypanosoma brucei variant surface glycoprotein and molecular modeling of a glycosylated surface coat', GLYCOBIOLOGY, 12, 10, pp. 607-612. Detail

Bond, C., White, M., Hunter, W. 2002, 'Mechanistic Implications for Escherichia coli Cofactor-dependent Phosphoglycerate Mutase Based on the High-resolution Crystal Structure of a Vanadate Complex', JOURNAL OF MOLECULAR BIOLOGY, 316, pp. 1071-1081. Detail

Bond, C., Shaw, M., Alphey, M., Hunter, W. 2001, 'Structure of the macrocycle thiostrepton solved using the anomalous dispersion contribution of sulfur', ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, D57, pp. 755-758. Detail

Bond, C., White, M., Hunter, W. 2001, 'High Resolution Structure of the Phosphohistidine-activated Form of Escherichia coli Cofactor-dependent Phosphoglycerate Mutase', JOURNAL OF BIOLOGICAL CHEMISTRY, 276, 5, pp. 3247-3253. Detail

Bond, C.S., Blankenship, R.E., Freeman, H.C., Guss, J.M., Maher, M.J., Selvaraj, F.M., Wilce, M.C.J., Willingham, K.M. 2001, 'Crystal Structure of Auracyanin, a "Blue" Copper Protein from the Green Thermophilic Photosynthetic Bacterium Chloroflexus aurantiacus', JOURNAL OF MOLECULAR BIOLOGY, 306, pp. 47-67. Detail

Kemp, L., Bond, C., Hunter, W. 2001, 'Crystallization and preliminary X-ray diffraction studies of recombinant Escherichia coli 4-diphosphocytidyl-2-C-methyl-D-erythritol synthetase', ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, D57, pp. 1189-1191. Detail

Bond, C.S., Kvaratskhelia, M., Richard, D., White, M.F., Hunter, W.N. 2001, 'Structure of Hjc, a Holliday junction resolvase, from Sulfolobus solfataricus', PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 98, 10, pp. 5509-5514. Detail

C12

Bond, C.S. 2003, 'Easy editing of Protein Data Bank formatted files with EMACS', JOURNAL OF APPLIED CRYSTALLOGRAPHY, 36, pp. 350-351. Detail

C2: Other Contribution to Refereed Journal

Bond, C.S., Bond, W.R., Bond, A.A. 2014, 'Try it out: Building Crystals', Australian Science Teachers' Journal, 60(2), 2, pp. 14-15. Detail

Bond, C.S. 2014, 'Crystallography To Infinity and Beyond', Australian Science Teachers' Journal, 60, 3, pp. 12-14. Detail

Bond, C.S. 2014, 'Therapeutic crystals', Australian Science Teachers' Journal, 60, 4, pp. 14-16. Detail

D: Major Review

Mackay, J., Landsberg, M., Whitten, A., Bond, C. 2017, 'Whaddaya Know: A Guide to Uncertainty and Subjectivity in Structural Biology', TRENDS IN BIOCHEMICAL SCIENCES, 42, 2, pp. 155-167. Detail

Blythe, A., Fox, A., Bond, C. 2016, 'The ins and outs of lncRNA structure: How, why and what comes next?', Biochimica et Biophysica Acta-Gene Regulatory Mechanisms, 1859, 1, pp. 46-58. Detail

I: Patent

Barkan, A., Small, I., Rojas, M., Bond, C.S., Fujii, S., Chong, Y. 2013, 'PEPTIDES FOR THE BINDING OF NUCLEOTIDE TARGETS', WO/2013/155555,  Detail






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